Y.-T. Chen, M. J. Scanlan, C. A. Venditti, R. Chua, Theiler, G., B. J. Stevenson, C. Iseli, A. O. Gure, T. Vasicek, R. L. Strausberg, C. V. Jongeneel, L. J. Old, and A. J. G. Simpson: Identification of cancer/testis-antigen genes by massively parallel signature sequencing. Proc. Natl. Acad. Sci.USA 102:7940-7945, 2005.

Y.-T. Chen, C. Iseli, C. A. Venditti, L. J. Old, A. J. G. Simpson, and C. V. Jongeneel: Identification of a new cancer/testis gene family, CT47, among expressed multi-copy genes on the human X chromosome. Genes Chromosomes & Cancer 45:392-400, 2006.

S. Gnjatic, H. Nishikawa, A. A. Jungbluth, A. O. Gure, G. Ritter, E. Jager, A. Knuth, Y.-T. Chen, L. J. Old: NY-ESO-1: Review of an immunogenic tumor antigen. Adv Cancer Res. 95:1-30, 2006.

T. Scognamiglio, E. Hyjek, J. Kao, and Y.-T. Chen: Diagnostic utility of HBME1, Galectin3, CK19, and CITED1 and evaluation of their expression in encapsulated lesions with questionable features of papillary thyroid carcinoma. Am. J. Clin. Pathol. , 2006.

S. Rohan, J. J. Tu, J. Kao, P. Mukherjee, F. Campagne, X. K. Zhou, E. Hyjek, M. A. Alonso, and Y.-T. Chen: Gene expression profiling separates chromophobe renal cell carcinoma from oncocytoma and identifies vesicular transport and cell junction proteins as differentially expressed genes. Clin. Cancer Res. 12:6837-6945, 2006.

R. K. Yantiss, A. M. Panczykowski, J. Misdraji, R. D. Odze, and Y.-T. Chen: A comprehensive study of non-dysplastic and dysplastic serrated lesions of the vermiform appendix. Am. J. Surg. Pathol. 31:1742-1753, 2007.

J. J. Tu, S. Rohan, J. Kao, N. Kitabayashi, S. Mathew and Y.-T. Chen: Gene Fusions between TMPRSS2 and ETS Family Genes in Prostate Cancer: Frequency and Transcript Variant Analysis by RT-PCR and FISH on Paraffin-Embedded Tissues. Mod. Pathol. 20:921-928, 2007.

Y. B. Chen, J. J. Tu, J. Kao. X. K. Zhou, and Y.-T. Chen: Survivin as a useful adjunct marker for the grading of papillary urothelial carcinoma. Arch. Pathol. Lab. Med. 132:224-231, 2008.

Y.-T. Chen, N. Kitabayashi, X. K. Zhou, T. J. Fahey III and T. Scognamiglio: MicroRNA analysis as a potential diagnostic tool for papillary thyroid carcinoma. Mod. Pathol. 21: 1139-1146, 2008.